Largely reduced grid densities in a vibrational self-consistent field treatment do not significantly impact the resultingwavenumbers.
نویسندگان
چکیده
Especially for larger molecules relevant to life sciences, vibrational self-consistent field (VSCF) calculations can become unmanageably demanding even when only first and second order potential coupling terms are considered. This paper investigates to what extent the grid density of the VSCF's underlying potential energy surface can be reduced without sacrificing accuracy of the resulting wavenumbers. Including single-mode and pair contributions, a reduction to eight points per mode did not introduce a significant deviation but improved the computational efficiency by a factor of four. A mean unsigned deviation of 1.3% from the experiment could be maintained for the fifteen molecules under investigation and the approach was found to be applicable to rigid, semi-rigid and soft vibrational problems likewise. Deprotonated phosphoserine, stabilized by two intramolecular hydrogen bonds, was investigated as an exemplary application.
منابع مشابه
Fourier grid Hamiltonian multiconfigurational self-consistent-field: A method to calculate multidimensional hydrogen vibrational wavefunctions
The Fourier Grid Hamiltonian Multiconfigurational Self-Consistent-Field ~FGH-MCSCF! method for calculating vibrational wavefunctions is presented. This method is designed to calculate multidimensional hydrogen nuclear wavefunctions for use in mixed quantum/classical molecular dynamics simulations of hydrogen transfer reactions. The FGH-MCSCF approach combines a MCSCF variational method, which d...
متن کاملSelf-Consistent hot spot tracing particles by kinetic simulations: With the emphasis on Cusp particle entry
One of the most important advantages of particle simulation as compared to fluid simulation is the capacity for working with and tracing particles. In particle simulations, the test particle method is usually used to get some idea of the behavior of plasma or other substances. In this method, first, a small number of particles are injected into the frame of static electromagnetic fields. Then, ...
متن کاملComparison of the numerical stability of methods for anharmonic calculations of vibrational molecular energies
On model examples, we compare the performance of the vibrational self-consistent field, variational, and four perturbational schemes used for computations of vibrational energies of semi-rigid molecules, with emphasis on the numerical stability. Although the accuracy of the energies is primarily dependent on the quality of the potential energy surface, approximate approaches to the anharmonic v...
متن کاملThe effect of polylactic acid support in stability and electrical field of heterocyclic coupled hexa peptide nano systems: A novel strateu to drug delivery
Biological materials. recently. are the building blocks of several self-assembling peptide and protein systems.The main challenge In molecular self-assembly is to design molecular building blocks that can undergospontaneous organization. These cyche peptides were produced by an alternating fl'ell number of D- and Laminoacids.which interact through non-covalent interactions co an array of selfas...
متن کاملDose GRID increase the unwanted photoneutron dose to the patients in GRID therapy?
Introduction: GRID therapy is a treatment modality in which a high dose of radiation in a single fraction is given to the tumor. This technique previously was used to treat bulky tumors with orthovoltage beams. Recently, studies have been conducted to suggest that GRID therapy with megavoltage photons can be useful in palliative treatments. On the other hand, there has always ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Molecules
دوره 19 12 شماره
صفحات -
تاریخ انتشار 2014